I hear that you are planning a new release of the iPad app this fall. I REALLY, REALLY hope that you address the inconvenience that highlightning and annotation does not follow with the sync, it seems to be only local on the desktop version. Also vice verse it should be possible to highlight/annotate and make notes in the app, and sync that back to the desktop version.
This lack of functionality of the app is really frustrating and makes the iPad app rather useless. Now I need to use it together with a proper pdf reader (pdf-notes) and dropbox, in order to make any use of it. Also, the reading experience in your app could really be better/smoother too.
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