I'm using Mendeley on a Mac desktop and the mobile version on iOS 7. The sync function on the iPad has totally stopped working for me, I've left it sitting on my desk 'checking for changes' for upwards of an hour with no success. Desktop app is not open. I added two new papers I was planning to read to a folder in the desktop app, synced the desktop app, and then closed it. If I can't add new papers to the app via syncing it's just as useless as it was before when it didn't support annotations or in-app reading. Really a disappointment, I very much enjoyed the two weeks or so where this worked and I could read papers on my iPad.
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